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1

A multi-site study using high-resolution HLA genotyping by next generation sequencing

C. L. Holcomb, B. Höglund, M. W. Anderson, L. A. Blake, I. Böhme, M. Egholm, D. Ferriola, C. Gabriel, S. E. Gelber, D. Goodridge, S. Hawbecker, R. Klein, M. Ladner, C. Lind, D. Monos, M. J. Pando, J.

Journal:

Tissue Antigens

Year:

2011

Language:

english

File:

PDF, 2.08 MB

english, 2011

2

Nutrition Knowledge, Body Satisfaction and Dietary Intake of College Students

C. Sealey-Potts, K. Hougen, C. Ferriola, D. Linehan

Journal:

Journal of the American Dietetic Association

Year:

2009

Language:

english

File:

PDF, 79 KB

english, 2009

3

Determining performance characteristics of an NGS-based HLA typing method for clinical applications

Duke, J. L., Lind, C., Mackiewicz, K., Ferriola, D., Papazoglou, A., Gasiewski, A., Heron, S., Huynh, A., McLaughlin, L., Rogers, M., Slavich, L., Walker, R., Monos, D. S.

Journal:

Year:

2016

Language:

english

File:

PDF, 486 KB

english, 2016

4

Role of TGFα and its receptor in proliferation of immortalized rat tracheal epithelial cells: Studies with tyrphostin and TGFα antisera

Patrice C. Ferriola, H. Shelton Earp, Richard Di Augustine, Paul Nettesheim

Journal:

Journal of Cellular Physiology

Year:

1991

Language:

english

File:

PDF, 1.15 MB

english, 1991

5

Epidermal growth factor dependence and TGFα autocrine growth regulation in primary rat tracheal epithelial cells

Patrice C. Ferriola, Alice T. Robertson, David W. Rusnak, Richard Diaugustine, Paul Nettesheim

Journal:

Journal of Cellular Physiology

Year:

1992

Language:

english

File:

PDF, 880 KB

english, 1992

6

Altered Growth Factor Dependence and Transforming Growth Factor Gene Expression in Transformed Rat Tracheal Epithelial Cells

Patrice C. Ferriola, Cheryl Walker, Alice T. Robertson, H. Shelton Earp, David W. Rusnak, Paul Nettesheim

Journal:

Molecular Carcinogenesis

Year:

1989

Language:

english

File:

PDF, 867 KB

english, 1989

7

The effect of azelastine and some other antiasthmatic and antiallergic drugs on calmodulin and protein kinase C

E. Middleton, P. Ferriola, G. Drzewiecki, R. Duane Sofia

Journal:

Inflammation Research

Year:

1989

Language:

english

File:

PDF, 508 KB

english, 1989

8

Sweetener Effects on Flaked Millet Breakfast Cereals

D. FERRIOLA, M. STONE

Journal:

Journal of Food Science

Year:

1998

Language:

english

File:

PDF, 90 KB

english, 1998

9

Expression of GPC3, an X-linked recessive overgrowth gene, is silenced in malignant mesothelioma

Murthy, Siva S, Shen, Tong, De Rienzo, Assunta, Lee, Wen-Ching, Ferriola, Patrice C, Jhanwar, Suresh C, Mossman, Brooke T, Filmus, Jorge, Testa, Joseph R

Journal:

Year:

2000

Language:

english

File:

PDF, 396 KB

english, 2000

10

Identification of a novel HLA-A23 variant allele, A23:50

D. Ferriola, S. Heron, C. Lind, D. S. Monos

Journal:

Tissue Antigens

Year:

2012

Language:

english

File:

PDF, 82 KB

english, 2012

11

Cellular Uptake of Phosphorothioate Oligodeoxynucleotides Is Negatively Affected by Cell Density in a Transformed Rat Tracheal Epithelial Cell Line: Implication for Antisense Approaches

T. Iwanaga, P.C. Ferriola

Journal:

Biochemical and Biophysical Research Communications

Year:

1993

File:

PDF, 314 KB

1993

12

Alterations in the Localization of F-Actin, Fibronectin, and Thrombospondin Occur Prior to Neoplastic Transformation in Rat Tracheal Epithelial Cells

C.A. Carter, M.M. Doherty, D.W. Rusnak, P. Nettesheim, P.C. Ferriola

Journal:

Experimental Cell Research

Year:

1994

File:

PDF, 1.26 MB

1994

13

Protein kinase C inhibition by plant flavonoids: Kinetic mechanisms and structure-activity relationships

Patrice C. Ferriola, Vivian Cody, Elliott Middleton Jr

Journal:

Biochemical Pharmacology

Year:

1989

Language:

english

File:

PDF, 1.03 MB

english, 1989

14

44-OR: Complete KIR haplotyping without family studies using Haplotype Specific Extraction

Cynthia Turino, Genaro Scavello, Deborah Ferriola, Mark Kunkel, Johannes Dapprich

Journal:

Human Immunology

Year:

2006

Language:

english

File:

PDF, 27 KB

english, 2006

15

68-OR: Haplotype linkage of HLA-B and HLA-C by tiled HSE (Haplotype-Specific Extraction)

Deborah Ferriola, Mark Kunkel, Aruna Akkapeddi, Johannes Dapprich, Nancy Murphy

Journal:

Human Immunology

Year:

2006

Language:

english

File:

PDF, 33 KB

english, 2006

16

14-W: Sequencing for the genomic characterization of HLA-A, B, C, DRB1 and DQB1 loci

C. Lind, D. Ferriola, K. Mackiewicz, M. D'Arcy, X. Gai, D. Goodridge, D. Sayer, J. Dapprich, D. Monos

Journal:

Human Immunology

Year:

2009

Language:

english

File:

PDF, 30 KB

english, 2009

17

15-OR: A Multi-Site Study Employing High Resolution HLA Genotyping by Next Generation 454 GS FLX Sequencing

Cherie L. Holcomb, Bryan Höglund, Matthew W. Anderson, Lisbeth A. Blake, Irena Böhme, Michael Egholm, Deborah Ferriola, Christian Gabriel, Damian Goodridge, Rolf Klein, Martha Ladner, Curt Lind, Dimit

Journal:

Human Immunology

Year:

2010

Language:

english

File:

PDF, 56 KB

english, 2010

18

Next-generation sequencing: the solution for high-resolution, unambiguous human leukocyte antigen typing

C. Lind, D. Ferriola, K. Mackiewicz, S. Heron, M. Rogers, L. Slavich, R. Walker, T. Hsiao, L. McLaughlin, M. D'Arcy, X. Gai, D. Goodridge, D. Sayer, D. Monos

Journal:

Human Immunology

Year:

2010

Language:

english

File:

PDF, 2.99 MB

english, 2010

19

52-OR: Targeted Enrichment for Complete Characterization of 1.4Mb of the MHC With Next Generation Sequencing

Deborah Ferriola, Katarzyna Mackiewicz, Curt Lind, Xiaowu Gai, Monica D'Arcy, Johannes Dapprich, Dimitri Monos

Journal:

Human Immunology

Year:

2010

Language:

english

File:

PDF, 61 KB

english, 2010

20

25-OR: Complete Genomic Sequencing of HLA-C*04:09N Using Next-Generation Sequencing Technology

Curt Lind, Deborah Ferriola, Kate Mackiewicz, David Sayer, Damian Goodridge, Dimitri Monos

Journal:

Human Immunology

Year:

2010

Language:

english

File:

PDF, 68 KB

english, 2010

21

158-P Complete characterization of 12 MHC genes for multiple samples by next-generation sequencing

Deborah Ferriola, Curt Lind, Steven Heron, Anh Huynh, Larissa Slavich, Ariella Sasson, Xiaowu Gai, Dimitri Monos

Journal:

Human Immunology

Year:

2011

Language:

english

File:

PDF, 44 KB

english, 2011

22

160-P Complete genomic characterization of 37 common and well-documented HLA class I alleles using next-generation sequencing technology

Curt Lind, Deborah Ferriola, Laura McLaughlin, Ariella Sasson, Xiaowu Gai, Dimitri Monos

Journal:

Human Immunology

Year:

2011

Language:

english

File:

PDF, 42 KB

english, 2011

23

Filling the gaps – The generation of full genomic sequences for 15 common and well-documented HLA class I alleles using next-generation sequencing technology

Lind, C., Ferriola, D., Mackiewicz, K., Papazoglou, A., Sasson, A., Monos, D.

Journal:

Human Immunology

Year:

2013

Language:

english

File:

PDF, 520 KB

english, 2013

24

435 Some biochemical properties of azelastine

SOFIA, D, MIDDLETONJR, E, FERRIOLA, P, DRZEWIECKI, G

Journal:

Journal of Allergy and Clinical Immunology

Year:

1988

Language:

english

File:

PDF, 135 KB

english, 1988

25

Demographic and clinical characteristics of nonconstipated female IBS patients in the united states

Nicholas J. Talley, Steve Kong, Patrice C. Ferriola, Allen W. Mangel

Journal:

Gastroenterology

Year:

2000

Language:

english

File:

PDF, 172 KB

english, 2000

26

Characterization of a new HLA-C04 allele, C 04:112

Ferriola, D., Heron, S., Lind, C., Monos, D. S.

Journal:

Tissue Antigens

Year:

2013

Language:

english

File:

PDF, 94 KB

english, 2013

27

Expression and organization of fibronectin and thrombospondin by pleural mesothelial cells and asbestos-induced mesothelioma cells

Ferriola, P.C., Stewart, Wendy

Journal:

Year:

1996

Language:

english

File:

PDF, 149 KB

english, 1996

28

125-P

Lind, Curt, Duke, Jamie, Ferriola, Deborah, Mackiewicz, Katarzyna, Papazoglou, Anna, Heron, Steven, Monos, Dimitri

Journal:

Human Immunology

Year:

2013

Language:

english

File:

PDF, 28 KB

english, 2013

29

OR04

Lind, Curt, Ferriola, Deborah, Huynh, Anh, Duke, Jamie, Papazoglou, Anna, Askar, Medhat, Berces, Attila, Christiansen, Mette, Dong, Wei, Gandhi, Manish, Hague, Tim, Horvath, Gyorgy, Hsu, Susan, Johnso

Journal:

Human Immunology

Year:

2014

Language:

english

File:

PDF, 35 KB

english, 2014

30

P082

Askar, Medhat, Thomas, Dawn, Ferriola, Deborah, Duke, Jamie, Lind, Curt, Monos, Dimitri

Journal:

Human Immunology

Year:

2014

Language:

english

File:

PDF, 35 KB

english, 2014

31

SNP-specific extraction of haplotype-resolved targeted genomic regions

Dapprich, J., Ferriola, D., Magira, E. E., Kunkel, M., Monos, D.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 4.11 MB

english, 2008

32

Identification of a novel HLA-DQB102 variant allele, DQB1 02:01:06

Heron, S., Ferriola, D., Lind, C., Monos, D. S.

Journal:

Tissue Antigens

Year:

2013

Language:

english

File:

PDF, 466 KB

english, 2013

33

Identification and characterization of a novel HLA-B hybrid allele, B*08:132 with Next Generation Sequencing

Papazoglou, A., Gasiewski, A., Huynh, A., Duke, J., Ferriola, D., Rogers, M., Lind, C., Monos, D. S.

Journal:

Tissue Antigens

Year:

2014

Language:

english

File:

PDF, 156 KB

english, 2014

34

Microtubule Actin Crosslinking Factor 1 Regulates the Balbiani Body and Animal-Vegetal Polarity of the Zebrafish Oocyte

Gupta, Tripti, Marlow, Florence L., Ferriola, Deborah, Mackiewicz, Katarzyna, Dapprich, Johannes, Monos, Dimitri, Mullins, Mary C., Barsh, Gregory S.

Journal:

Year:

2010

Language:

english

File:

PDF, 5.15 MB

english, 2010

35

Phenotype and differentiation potential of a novel rat tracheal epithelial cell line.

Doherty, M M, Liu, J, Randell, S H, Carter, C A, Davis, C W, Nettesheim, P, Ferriola, P C

Journal:

American Journal of Respiratory Cell and Molecular Biology

Year:

1995

Language:

english

File:

PDF, 1.26 MB

english, 1995

36

Mucin production by SPOC1 cells--an immortalized rat tracheal epithelial cell line.

Randell, S H, Liu, J Y, Ferriola, P C, Kaartinen, L, Doherty, M M, Davis, C W, Nettesheim, P

Journal:

American Journal of Respiratory Cell and Molecular Biology

Year:

1996

Language:

english

File:

PDF, 1.07 MB

english, 1996

37

HLA typing by NGS in the clinical lab: our one and a half years experience

Duke, Jamie, Ferriola, Deborah, Huynh, Anh, Heron, Steve, Gasiewski, Allison, Huang, Yanping, Lind, Curt, McLaughlin, Laura, Mehler, Hilary, Papazoglou, Anna, Rogers, Marianne, Slavich, Larissa, Walke

Journal:

Human Immunology

Year:

2015

Language:

english

File:

PDF, 39 KB

english, 2015

38

Enhanced characterization of 109 genomic dna reference material for 6 HLA loci by next-generation sequencing (NGS)

Ferriola, Deborah, Duke, Jamie, Huynh, Anh, Gasiewski, Alison, Rogers, Marianne, Slavich, Larissa, McLaughlin, Laura, Jennings, Larry, Bettinotti, Maria, Kalman, Lisa, Monos, Dimitri

Journal:

Human Immunology

Year:

2015

Language:

english

File:

PDF, 251 KB

english, 2015

39

Generation of high confidence HLA genotyping and consensus sequences for class I HLA loci using the NGS-based Omixon Holotype HLA typing system and the Illumina Miseq platform

Clark, Peter M., Duke, Jamie, Ferriola, Deborah, Papazoglou, Anna, Hassan, Aniqa, Monos, Dimitri

Journal:

Human Immunology

Year:

2015

Language:

english

File:

PDF, 40 KB

english, 2015

40

Abnormalities in Growth Regulation of Transformed Rat Tracheal Epithelial Cells

Ferriola, P.C., Steigerwalt, R., Robertson, AT., Nettesheim, P.

Journal:

Year:

1990

File:

PDF, 1.55 MB

1990

41

The Role of Growth Factors in the Regulation of Proliferation of Tracheobronchial Epithelium

Nettesheim, Paul, Ferriola, Patrice, Steigerwalt, Ronald, Robertson, Alice, Rundhaug, Joyce

Journal:

Year:

1992

Language:

english

File:

PDF, 785 KB

english, 1992

42

Automation of the amplification and library preparation steps for HLA typing using the NGS-based Holotype HLA kit and the Hamilton STARlet system

Huang, Yanping, Galbraith, Matt, Huynh, Anh B., Ferriola, Deborah, Monos, Dimitri

Journal:

Human Immunology

Year:

2015

Language:

english

File:

PDF, 36 KB

english, 2015

43

Deriving HLA genotyping from whole genome sequencing data using Omixon HLA twin(tm) in G3’s global clinical study

Juhos, Szilveszter, Vágó, Tünde, Ferriola, Deborah, Duke, Jamie, Vörös, Szilárd, Brown, Bradley O., Marvasty, Idean, Hague, Tim, Monos, Dimitri

Journal:

Human Immunology

Year:

2015

Language:

english

File:

PDF, 42 KB

english, 2015

44

Towards allele-level human leucocyte antigens genotyping - assessing two next-generation sequencing platforms: Ion Torrent Personal Genome Machine and Illumina MiSeq

Duke, J. L., Lind, C., Mackiewicz, K., Ferriola, D., Papazoglou, A., Derbeneva, O., Wallace, D., Monos, D. S.

Journal:

International Journal of Immunogenetics

Year:

2015

Language:

english

File:

PDF, 809 KB

english, 2015

45

OR53 Three case reports: NGS-based high resolution HLA typing permits better assessment of donor-recipient compatibility in solid organ transplant

Huang, Yanping, Gasiewski, Allison, Mehler, Hilary, Heron, Steven, Ferriola, Deborah, Monos, Dimitri

Journal:

Human Immunology

Year:

2016

Language:

english

File:

PDF, 33 KB

english, 2016

46

The next generation of target capture technologies - large DNA fragment enrichment and sequencing determines regional genomic variation of high complexity

Dapprich, Johannes, Ferriola, Deborah, Mackiewicz, Kate, Clark, Peter M., Rappaport, Eric, D’Arcy, Monica, Sasson, Ariella, Gai, Xiaowu, Schug, Jonathan, Kaestner, Klaus H., Monos, Dimitri

Journal:

Year:

2016

Language:

english

File:

PDF, 1.68 MB

english, 2016

47

Targeted Next-Generation Sequencing for Human Leukocyte Antigen Typing in a Clinical Laboratory: Metrics of Relevance and Considerations for Its Successful Implementation

Gandhi, Manish J., Ferriola, Deborah, Huang, Yanping, Duke, Jamie L., Monos, Dimitri

Journal:

Archives of Pathology & Laboratory Medicine

Year:

2017

Language:

english

File:

PDF, 869 KB

english, 2017

48

Characterization and Comparative Analysis of Ancient Earthen Plasters from the American Southwest

Bass, Angelyn, Porter, Douglas, Spilde, Mike, Guebard, Matthew, Shaum, Katherine, Ferriola, Nicholas

Journal:

Year:

2017

Language:

english

File:

PDF, 62.25 MB

english, 2017

49

P050 Rapid, high resolution HLA genotyping using nanopore sequencing

Clark, Peter M., Ferriola, Deborah, Monos, Dimitri S.

Journal:

Human Immunology

Year:

2017

Language:

english

File:

PDF, 30 KB

english, 2017

50

Characterization of 108 Genomic DNA Reference Materials for 11 Human Leukocyte Antigen (HLA) Loci: A GeT-RM Collaborative Project

Bettinotti, Maria P., Ferriola, Deborah, Duke, Jamie L., Mosbruger, Timothy L., Tairis, Nikolaos, Jennings, Lawrence, Kalman, Lisa V., Monos, Dimitri

Journal:

The Journal of Molecular Diagnostics

Year:

2018

Language:

english

File:

PDF, 378 KB

english, 2018

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